Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015862776.1_cds_XP_016515456.1_27799
CDS Infomation

[gene=LOC107832162] [db_xref=GeneID:107832162] [protein=uncharacterized protein LOC107832162] [protein_id=XP_016515456.1] [location=join(32935..33019,33110..33171,33380..33430,33526..33552,33982..34086,36479..36586,36779..36850,36932..36982,37275..37337,37428..37552,39396..39597,40119..40835)] [gbkey=CDS]
Sequence

ATGGAGGAAAAGGATCAGCAGCCAGCAGCACCTAAGATACAGATATACCCCACCTCCACT
GGTGAAATCTCTCCCTTTTGGCGAGAGAAATACGAAAGAGATGCAAAGAAGTACTGGGAT
ATCTTCTACAAGCGCCATCAAGACAAATTCTTTAAAGACAGGCACTACCTGGACAAAGAA
TGGGGCCGATACTTCTCTGGGACTGAGGGGAAAGTCATACTTGAGGTTGGCTGTGGGGCT
GGAAATACCATCTTTCCTTTGCTTGCTACAATACCAAATATATTTGTCCATGCCTGCGAT
TTTTCACCTCGAGCTGTGAACTTAGTTAAGTCGCACAAGGATTTTGATGATGCTCGGGTG
AATGCATTTGTCTGTGATCCAACCGTGGATGACGTAATCCAGCATATTTCTCCTTCATCA
GTGGATGTTGTTACCATGATATTTGTTCTATCTGCAGTATCCCCTGAGAAGATGCCTCTG
ATGTTACAAAACATCAGAAAAGTTCTGAAGAAAGATGGCTGTGTCTTATTTCGTGACTAT
GCAACTGGTGACCTTGCACAGGAAAGGCTTATTTCCAAGGAACAAAAAATCAGTGATAGC
TTCTATGTTCGGGGTGATGGGACTCGGGCTTTCTACTTTTCTGATGAGTTCTTAGTGAAT
CTCTTCAATGAAAATGGTTTTGATTCTGAGGAGCACATCTTGTGTTTCAAGCAAGTGGAA
AATCGGTCAAGGGAGTTGGTGATGAATAGGCGTTGGGTTCAAGCTGTATTCCGTGTTGGT
AGTGGGAAATCTGGAGGGAAAACTGAAAGCAAGGTGAAATTCCTTGGTAAGGATAATGAC
AAGCCTGAAATACAAAAAGTTGCCCATGAAGACTCTGCAAATGAGACTGAAGTTGATATC
TCCGAGGGGATGGCTCTTGAAATGTTTGGTATTTCATCTCCCAAGGAGGAGATTCTTGAT
GTCATCTCCAGAGACTATTCTTTCAAGATAAATGTCCTCTCAAAAGAGTATCAGCATACC
TGCAAATCAACTGGCTTAATGTTATGGGAATCAGCTCGGCTTATGGCTTCTGTGCTTGCT
ACTAACCAGACCATTGTTTCAGGGAAAAGTGTTTTAGAGCTGGGTTGTGGATGTGGGGGC
ATTTGCTCTATGGTTGCTGCTAAATCTGCTGATCTTGTGGTTGCCACTGATGGAGACACA
AAAGCACTTGATCTGTTAAACCAGAATGTCGCTCTGAATCTCCAAGCATTAAGTCTTGCA
AGTCTAATAACAAAAAAGCTTGAGTGGGGAAATAGAGATGATGTAGAGTCCATCAAGAGG
CTAAATGATAGAGGTTTTGATGTCATAATAGGCACAGATGTCACTTATGTTGCTGATGCA
ATCTCTCCTTTGTTTGCAACTGCAAAAAAGCTGATCCGATCTGACAGAGGCGATAAGGAG
GATAGTACACCAGCTCTAATCCTTTGTCATGTCTTTCGAAGAGTTGATGAACCATCTATA
CTTTCAGCAGCGTCTGAATTTGGTTTCAGGTTGGTGGATAGGTGGCCTGATGCACTTACC
CGAGCTAGCACATTTCAGAACATTATCCAAAGCTGGTTCTCCCACGGCAATCTTGAAGCT
TGTGTTCCTACCACTGCACTGAATATTCTGTATTTCCACAAGTTGTAG

Peptide Sequence

PEP ID

XP_016515456.1
PEP Infomation

PREDICTED: uncharacterized protein LOC107832162 [Nicotiana tabacum]
Sequence

MEEKDQQPAAPKIQIYPTSTGEISPFWREKYERDAKKYWDIFYKRHQDKFFKDRHYLDKE
WGRYFSGTEGKVILEVGCGAGNTIFPLLATIPNIFVHACDFSPRAVNLVKSHKDFDDARV
NAFVCDPTVDDVIQHISPSSVDVVTMIFVLSAVSPEKMPLMLQNIRKVLKKDGCVLFRDY
ATGDLAQERLISKEQKISDSFYVRGDGTRAFYFSDEFLVNLFNENGFDSEEHILCFKQVE
NRSRELVMNRRWVQAVFRVGSGKSGGKTESKVKFLGKDNDKPEIQKVAHEDSANETEVDI
SEGMALEMFGISSPKEEILDVISRDYSFKINVLSKEYQHTCKSTGLMLWESARLMASVLA
TNQTIVSGKSVLELGCGCGGICSMVAAKSADLVVATDGDTKALDLLNQNVALNLQALSLA
SLITKKLEWGNRDDVESIKRLNDRGFDVIIGTDVTYVADAISPLFATAKKLIRSDRGDKE
DSTPALILCHVFRRVDEPSILSAASEFGFRLVDRWPDALTRASTFQNIIQSWFSHGNLEA
CVPTTALNILYFHKL

Transcript Sequence

Gene sequence data has not been registered.